Browse of TCMCG080C03566 protein

CDS

Accession Number	TCMCG080C03566
gbkey	CDS
Protein Id	XP_027928254.1
Location	complement(join(42020987..42021555,42024074..42024445,42025089..42026157,42026385..42026680,42027079..42027157,42027292..42027379,42027748..42027895,42027970..42028213,42029145..42030512,42032340..42032600,42033188..42033431,42033852..42033911,42034685..42035017,42035105..42035183,42035324..42035400,42035480..42035557,42037988..42038068,42038150..42038237,42038361..42038447,42042432..42042571,42042646..42042719,42043618..42043743))
Gene	LOC114184993
GeneID	114184993
Organism	Vigna unguiculata

Protein

Length	1986aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA521068
db_source	XM_028072453.1
Definition	mediator of RNA polymerase II transcription subunit 13 [Vigna unguiculata]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGGTCGGAGTCTGACCCAAACATAAACAGATTCGCCGTATCTCCTTTGCAGCAAAACCCTAATTCAAATCACCGAAGCCTTCATAGCAATATTGCAGTTATGTGGACAAATGTTTTCAAAATCGGAAGTTTGCATCAGATATCATGGTTCCAGTTTCATCCTCATGAACCTGACCTAAACCCTCTACCTGACAAAAGTGTAAAAGTGGACCAAAAGGATGCCGCAAATTTACTGGTGCTTTCATCACATCTACAGCTGCAGAAGGAGGGATTTCTCAGCACATGGACCAATTCCTTTGTTGGACCTTGGGATCCATCCCAGGGCTTGCATAATCCAGACGAAAAGATTAAGCTGTGGCTTTTTCTTCCGGGGCGTCATTCATCTGTTGTCGAGACTGCTCAGCCAGCAGTATCCAGATTAAGAGTTGTTGCTTCTGGACTTTGGTTGGCTCCTGGCGATTCAGAAGAGGTTGCAGCTGCTCTCTCTCAAGCTTTGAGGAGTTGTATAGAAAGGGCTTTGCTTGGGTTATGTTACATGAGATTTGGAGATGTATTTTCAAAGTTTCATCAATTTCAAAGTGAAGAACTGTTCAGAAGAGGACAGCCTGCAGTTGAGTTTGCCTTTGCTGCAACTGAGGAAGCCATCTTCATACATGTCATAGTGTCTTCAAAGCATATCCGGATTCTTACGACAAGTGATTTGGAAAAAGTATTAAAACATTCGATGGAGTCTACATGTAGACTTCCAGTGATTGTTTCTCCTCATGGAATGCGTGGCAGTTTGACTGGTTGTTCTCCAAGTGATCTTGTCAAGCAAAGTTATTTCAGCAGTTCTACCAAATTTAGGGTGTCCAATGGAATTATAGGTCTACCATATAATGTTTCCCAGGGTGTTGGTTGCCAGCTGAGGGGGCAAAATTGTTATGTTGAAGTGAGTCTGGGCTTCTCAAGATCTGGAACTGACAACTCTTTGCTGCCAAACAAAATTAGTGCCAGGAATTTACCCACACTTCATGTTGCTGAGTCCCCTATTACGGGACGAAGTGATCACAAGGGATCAGCAGAACACTTGTCAGATTATGAGAAAACATTTCTGTATCCAGCTGAGGCAGTGCTCGTGCCAGTTTTACAAACATCATTAGCGAGGTCTTCCTTGAGAAGATTTTGGCTGCAGAATTGGATGGGACCATCTCTTCCCAGTTCCTCTTCCTTTATTCACTGTGCTGGTAATGAGGATTGTTGTGAAGATCCTTGGATTGAAATCAATGGAGCCCGTATGCAAAATAGTTATGATAGTAGTAGCAATAGCAATAGTAGCAGTATTAGTAGCTTAAGTGCCAGTTCTAGTGATAGTGATTACAAGACTACAGGTCCAAGTGAACTGGAGGCAGATGCTGATTCTTTAACTTGTAGACAGTCTATGGTGTCTTCTGCTGATCAACTGGATAGTGATGGCCCCAAATTGGGCTCTAAGAGGTCTCGAACAGGGGTGACAGAGTCATTAAGTACAGCCACAAACATTCCGGTGCAAGATACTTACATGTCTGATTTTGGTTCTGTTGAAGTGAACAATTCAGCTATTACAGGAGTAGGAAATGAGCCTATTGGGTCTTACTGGGACTGGGATGATGACGATAGGGGCACGGAAATGGATATTCAAGCCCTTTTATCAGAATTTGGTGATTTTGGTGACTTCTTTGAAAACGATGTCTTGCCTTTTGGAGAGCCCCCAGGAACAGCAGAATCTCAGGCACTTATGTTTTCTTCCCCAGATTATGGAGATGTCAACAGCAGTCCAGGTGGTGTGATAGATGTTCCAGATCAAATGCTTTTACCTGTTGGGTTTCCTTCCTTTGAGAGCTTTAACCCCCCTCCTTCAACATCCGTAGAGGAATTTCTTAACAAAAGTCAAGATAACTTCAATAACTCTATGTCCTTGGGTCCGTCCAATCATTCTCAGATGTTGTATACAAGGGAGTTTGATCATATAATGAAAGCTGAAGCAATGATGACATTTGCTCCTGAATTTGGTGCTGTTGAGACCCCTACCTGTGAGCTATCTACAACATTATTCAGAAGCCCATATTTTCCAAAATGTCGTAAAGCAGAGAGTTCAAATTCAAGTTCAAACAATTACTTATATGGTGCAGCACCACCCTCTTCTCCTTGCAATGAAGGATCGGAAGGGAAGAATGGAATGTCTGTCAACACAAAAACAGGGGCTGGAAAACATGATTCTAGTACAAGTCTCTTCTCAAAACATTACTACACATTTGTGGAAAGTAGGGAAGAAAAAAATGATAAAAGTCTTGTCGTATGTAATGATGATAGCATTACTAAATCTGACGGGATACTGCCACTCTCAAACATTGGTTCTAATGCTATTGTCAAGTCTTCCCTTAGGAAGACAGCTGAAGGCACCCATGAACCAGAGCATGTTCTTCTATCTGCAAAAACTTTGTTGGCTACTGATATCACATGTGTTATGTTGCAAGCTTCCGTGTGCAGATTACGTCATACTCTCTTATCTTCTGGTAACCTAATGCCCGGTTTCAGTAGGTCAACCGGGGTTTCATTTTTGAATCAGCTTCCTAGTGACCCAAATACAGCAACAGACAATATATCTGCCAAGTATGATGTGAAGAAGAAAGAAAATATACCCATTCGAATTGCAGGTGATATTGATGGAGGAATGCTTGATGGTCACCTGAATGCCCCTGTTGGTGTTTGGCGCACATTAGGATCTTCAAAAGTTATAAAATCTTCAAATTCACCTAACATGGAAATTGGTCCTTCTTTTTCTCACAGTTCTTTCAACGAAGAAGGTATTCTTTCATATGGTCAAAGGAAACCGCTTCAGGAGCTCCTTGATGGGATTGCTTTGCTTGTCCAACAAGCTATTTCCTTTGTTGATCTGGCCTTGGATGCAGATTGTGGTGATGGTCCGTATGGTTTACTTGCAATGCAAGAACAGTGGAGGCGTGGATTCTGTTGTGGCCCTTCCATGGTTCATGCTGGCTGTGGGGGAACTCTTGCCTCTTCTCATTCGCTGGACATTGCTGGCTTGGAGTTAGTGGATCCACTTTCTGCCGATGTTCATGCATCCACTGTCATCAGTTTGCTGCAGTCTGACATAAAAACAGCTTTGAAATCTGCTTTTTCTAATTTGGAAGGGCCATTATCTATAACTGACTGGTGCAAAGGATGCAATCCATTGGTTGATACCGGAAGCATAGTTGATGGAGTCTCTGTTGAATCGACCAATAATGAATGTAGAGATTCTTCAGAACCAATGAGTCCATCCCAATCATCTGTTGGTGGATCTTCCAGTATTAAGGTTTCCAACATGATGGATGGTGCTAAGGTGGATGAGATTTCTCAAAGGAGACCTGGCCAGGATTTATGCAGTACAGAGTCAGAGCAGCAAACATTTTCCCGACTTAAACCTACTCTTATTGCTCTTCCATTTCCTTCTATACTTGTAGGGTATCAGGATGATTGGCTCAAGACATCAGCAAACTCCTTGCAGCATTGGGAAAAAGCTCCTCTAGAGCCCTATGCTCTACAGAAACCTATTACGTATCATGTGGTATGCCCTGACATTGATCCCCTTACTTCTGCTGCTGCTGATTTTTTTCAACAACTAGGAACAGTGTACGAGACATGCAAGCTGGGTACTCATTCACCTCAAGGCTTAGGGAATCAGATGGAGATAGAGTCTTCAAAGTTGTCATCTTGTGGTTTTGTTTTACTTGACTGCCCCCAATCAATGAAGATTGAGAGCAGTAATGCATCTCTTGTTGGTTCAGTAAGTGATTATTTTTTATCGTTATCAAATGGCTGGGACCTGACTAGTTATCTCAAGTCTCTTTCTAAGGCACTTAGAGGTTTGAAAATTGGCTCGTGCTTTTCTACAAACCCCAGCGAAGGAAGTAACAGTTCGTGCTTGGTAATCTATGTGGTGTGCCCATTTCCTGATCCCACTGCAATTTTGCAAACTGTAATTGAATCTTCTGTTGCGATTGGATCTGTAGTCCAACAGTTGGATAGAGAGAGGAAATCTTGCTTGCATAGTCAGGTTGTGAAGGCATTAAGTGGCTTGGCTGCTGTCGATGAGGCTTCTCCATCTAATGTTCTTGTGCTTTCAGGGTTTAGTATTCCAAAATTGGTCTTGCAGATTGTGACTGTGGATGCCATTTTCAGAGTCACTAGCCCATCTGTTAGCGAACTTGTCATTTTAAAAGAGACTGCATTTACTGTGTACTGCAAAGCTCGTCGAATTTCACGTGGAATCTCTAGTGATTTTTCTCAGTCTGCATTTTCTGGTAGATCTCATTCTGTTTTGACGCAGCTGCCTTCTCCCATCTCTGGGATGTGGAAAGATTGTGTTGGTCCTCGAATGGCAGGACATTCTCTTCCAAGAGAGGGTGACATAGATGCTAGCTTGAGGCCTGGTACGTGGGATAATTCTTGGCAGCCAACAAGGACTGGGGGGCTAAGCTGTGATCCAAGTAGAACTGGGGATATTTTCCTCCTTGATGAAATTCGTTACATGTTTGAACCCCTTTTTATTCTGGCAGAACCAGGTTCTCTTGAAAGTGGTATTTCAGTCATTGGTAGTCCCACTTCAGAATCTTCCAAGGCACTGGTAGATGACAGTAGTGGTAACTATGTACAGAGTACAAGTACAGCAGGAAGTGTGGAGTCTGCTTCAAGCACTGATGGATCTGGGTCTGATCCGAAGAGTCCTCCAAGCCTACATTGTTGCTATGGATGGACAGAGGACTGGCGTTGGCTTGTATGCATTTGGACAGATTCGAGGGGAGAATTGCTAGACTGTAACATTTTCCCCTTTGGTGGAATAAGCAGTAGGCAGGATACAAAGGGACTGCAGTGCCTATTTGTTCAAATTCTTCAGCAAGGTTGTCTGATAATTCAATCTTGTGACCCTGGCCTTGCAAGGCCTCGAGATTTTGTGATAGCACGCATTGGAGGGTTTTATGAGCTCGAGTATCTTGAATGGCAGAAAGCCATTTATTCAGTTGGTGTATCTGAGATGAAGAGATGGCCTCTGCAATTGCGGAAATCTATGTCTGATGGGTTGTCTGCAACGAGTAATGGTTCTTCTTTGCAACAACAAGACATGAGTTTGATCCCAGAACGAACTCTTCCTTCCTCGCCTAGTCCCTTGTACAGCCCCCATACCAAATCCACTGGTTTTATGAAAGGCAATTTAGGGCAACCTACTGCAAGAAAACAGCTTATGGGTGGACATTCCATGGTTGACAATTCAAGGGGTTTGCTTCATTGGGCACAAAGCATTAGTTTTGTTGCAGTTTCCATGGACCATACATTACAGCTAGTTCACCCAGCAGATTCCTCCACTCCTGGTTACATCGAAGGTTTCACTCCAGTGAAGTCTCTTGGTTCTACGTCTTCTGCATACATTCTAATTCCTTCTCCCAGCATGCGATTTCTTCCTCCAACAGTTTTTCAACTCCCCACGTGCCTCACAGCAGAGTCACCACCACTGGCTCATCTTCTTCACAGCAAGGGTTCTGCTCTTCCTCTCTCTGCTGGATTTGTGGTTTCAAAAGCAGTACCTTCCATGAGGAAGGATTACAGAAGCAACCTAAAGGAAGAATGGCCCTCTATACTTTCAGTGAGCCTCATTGACTACTATGGAGGTACTAACATCCCCCAAGAGAAAGTTGTCCGAGGAATTAACAAGCAAGTTGGTAGAAGTTTAAGCTGGGAAGCTAAAGATTTTGAAATTGAGACCCACTTGGTTCTGGAGTCTATTGCAGCAGAGCTTCATGCCTTGTCTTGGATGACAGTGAGCCCCGCATACTTAGAGCGGCGAACTGCGCTTCCCTTCCACTGTGACATGGTTCTAAGACTAAGAAGACTTCTTCACTTTGCCGATAAAGAGCTCACCAAGCAGTCAGAGAAATCTTGA

Protein:   MRSESDPNINRFAVSPLQQNPNSNHRSLHSNIAVMWTNVFKIGSLHQISWFQFHPHEPDLNPLPDKSVKVDQKDAANLLVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVETAQPAVSRLRVVASGLWLAPGDSEEVAAALSQALRSCIERALLGLCYMRFGDVFSKFHQFQSEELFRRGQPAVEFAFAATEEAIFIHVIVSSKHIRILTTSDLEKVLKHSMESTCRLPVIVSPHGMRGSLTGCSPSDLVKQSYFSSSTKFRVSNGIIGLPYNVSQGVGCQLRGQNCYVEVSLGFSRSGTDNSLLPNKISARNLPTLHVAESPITGRSDHKGSAEHLSDYEKTFLYPAEAVLVPVLQTSLARSSLRRFWLQNWMGPSLPSSSSFIHCAGNEDCCEDPWIEINGARMQNSYDSSSNSNSSSISSLSASSSDSDYKTTGPSELEADADSLTCRQSMVSSADQLDSDGPKLGSKRSRTGVTESLSTATNIPVQDTYMSDFGSVEVNNSAITGVGNEPIGSYWDWDDDDRGTEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALMFSSPDYGDVNSSPGGVIDVPDQMLLPVGFPSFESFNPPPSTSVEEFLNKSQDNFNNSMSLGPSNHSQMLYTREFDHIMKAEAMMTFAPEFGAVETPTCELSTTLFRSPYFPKCRKAESSNSSSNNYLYGAAPPSSPCNEGSEGKNGMSVNTKTGAGKHDSSTSLFSKHYYTFVESREEKNDKSLVVCNDDSITKSDGILPLSNIGSNAIVKSSLRKTAEGTHEPEHVLLSAKTLLATDITCVMLQASVCRLRHTLLSSGNLMPGFSRSTGVSFLNQLPSDPNTATDNISAKYDVKKKENIPIRIAGDIDGGMLDGHLNAPVGVWRTLGSSKVIKSSNSPNMEIGPSFSHSSFNEEGILSYGQRKPLQELLDGIALLVQQAISFVDLALDADCGDGPYGLLAMQEQWRRGFCCGPSMVHAGCGGTLASSHSLDIAGLELVDPLSADVHASTVISLLQSDIKTALKSAFSNLEGPLSITDWCKGCNPLVDTGSIVDGVSVESTNNECRDSSEPMSPSQSSVGGSSSIKVSNMMDGAKVDEISQRRPGQDLCSTESEQQTFSRLKPTLIALPFPSILVGYQDDWLKTSANSLQHWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQGLGNQMEIESSKLSSCGFVLLDCPQSMKIESSNASLVGSVSDYFLSLSNGWDLTSYLKSLSKALRGLKIGSCFSTNPSEGSNSSCLVIYVVCPFPDPTAILQTVIESSVAIGSVVQQLDRERKSCLHSQVVKALSGLAAVDEASPSNVLVLSGFSIPKLVLQIVTVDAIFRVTSPSVSELVILKETAFTVYCKARRISRGISSDFSQSAFSGRSHSVLTQLPSPISGMWKDCVGPRMAGHSLPREGDIDASLRPGTWDNSWQPTRTGGLSCDPSRTGDIFLLDEIRYMFEPLFILAEPGSLESGISVIGSPTSESSKALVDDSSGNYVQSTSTAGSVESASSTDGSGSDPKSPPSLHCCYGWTEDWRWLVCIWTDSRGELLDCNIFPFGGISSRQDTKGLQCLFVQILQQGCLIIQSCDPGLARPRDFVIARIGGFYELEYLEWQKAIYSVGVSEMKRWPLQLRKSMSDGLSATSNGSSLQQQDMSLIPERTLPSSPSPLYSPHTKSTGFMKGNLGQPTARKQLMGGHSMVDNSRGLLHWAQSISFVAVSMDHTLQLVHPADSSTPGYIEGFTPVKSLGSTSSAYILIPSPSMRFLPPTVFQLPTCLTAESPPLAHLLHSKGSALPLSAGFVVSKAVPSMRKDYRSNLKEEWPSILSVSLIDYYGGTNIPQEKVVRGINKQVGRSLSWEAKDFEIETHLVLESIAAELHALSWMTVSPAYLERRTALPFHCDMVLRLRRLLHFADKELTKQSEKS